Ala_g21449


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g21449

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00155620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
AMTR_s00081p00056740 OTP82,... Pentatricopeptide repeat-containing protein At1g08070,... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
Aspi01Gene10220.t1 OTP84, Aspi01Gene10220 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene10387.t1 REME1, Aspi01Gene10387 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0003.g008050 No alias not classified & original description: CDS=1-3306 0.02 OrthoFinder output from all 47 species
Azfi_s0213.g058286 No alias not classified & original description: CDS=1-3009 0.03 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.02 OrthoFinder output from all 47 species
Ceric.31G020200.1 Ceric.31G020200 not classified & original description: pacid=50574865... 0.03 OrthoFinder output from all 47 species
Len_g17531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03803 VAC1, ECB2, ATECB2 not classified & original description: none 0.14 OrthoFinder output from all 47 species
Pir_g02269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g13390 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g56905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g57215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60423 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61389 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63824 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22621 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020215 No alias not classified & original description: CDS=1-5316 0.1 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g10477 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g10509 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g12231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14540 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g24796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g30280 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39953 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo5521 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.02 OrthoFinder output from all 47 species
Spa_g50388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 30 54
IPR002885 Pentatricopeptide_repeat 2 19
No external refs found!