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  5. Lfl_g02291

Lfl_g02291 (ATH1, ATATH1, ABCA2)


Aliases : ATH1, ATATH1, ABCA2

Description : subfamily ABCA transporter & original description: none


Gene families : OG0001787 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001787_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g02291

Target Alias Description ECC score Gene Family Method Actions
AT3G47730 ATH1, ATATH1, ABCA2 ATP-binding cassette A2 0.02 OrthoFinder output from all 47 species
AT5G61690 ATH15, ATATH15 ABC2 homolog 15 0.02 OrthoFinder output from all 47 species
Aspi01Gene08539.t1 ATH1, ATATH1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08540.t1 ATH11, ATATH11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08540.t2 ATH11, ATATH11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36721.t1 ATH1, ATATH1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.66 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Cre14.g613950 ATH1, ATATH1, ABCA2 ABC transporter A family member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os08g30740.1 ATH1, ATATH1,... fatty acid transporter (ABCA). subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Mp3g20090.1 ABCA1, AtABCA1 subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Mp7g18500.1 ATH1, ATATH1, ABCA2 fatty acid transporter (ABCA). subfamily ABCA transporter 0.03 OrthoFinder output from all 47 species
Msp_g36286 ATH15, ATATH15 subfamily ABCA transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08430 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g52242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47335 ATH1, ATATH1, ABCA2 subfamily ABCA transporter & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 575 719
No external refs found!