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  5. Ala_g23647

Ala_g23647


Description : borate transporter *(BOR) & original description: none


Gene families : OG0000669 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000669_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g23647
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00091060 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT3G06450 No alias HCO3- transporter family 0.02 OrthoFinder output from all 47 species
AT3G62270 No alias HCO3- transporter family 0.04 OrthoFinder output from all 47 species
AT5G25430 No alias HCO3- transporter family 0.03 OrthoFinder output from all 47 species
Adi_g056139 BOR1 borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18421 No alias borate transporter *(BOR) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07949 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g13939 No alias borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g00759 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01354 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04720 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05853 No alias borate transporter *(BOR) & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g30944 No alias borate transporter *(BOR) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g19672 No alias borate transporter *(BOR) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36417 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017223001 ATBOR4, BOR4 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01035800001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
Lfl_g17468 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32513 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03809 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g02119 No alias borate transporter *(BOR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017717 No alias borate transporter *(BOR) & original description: CDS=1-1821 0.04 OrthoFinder output from all 47 species
Solyc06g071500.3.1 Solyc06g071500 borate transporter (BOR) 0.05 OrthoFinder output from all 47 species
Tin_g02779 No alias borate transporter *(BOR) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002898_P002 Zm00001e002898 borate transporter (BOR) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006820 monoatomic anion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR011531 HCO3_transpt-like_TM_dom 201 373
IPR011531 HCO3_transpt-like_TM_dom 459 549
IPR011531 HCO3_transpt-like_TM_dom 7 178
No external refs found!