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  5. Ala_g23774

Ala_g23774


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g23774

Target Alias Description ECC score Gene Family Method Actions
Aev_g21001 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g47260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18957 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0033.g025053 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2580 0.06 OrthoFinder output from all 47 species
Azfi_s0045.g029773 No alias not classified & original description: CDS=1-489 0.06 OrthoFinder output from all 47 species
Cba_g70181 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.27G010800.1 Ceric.27G010800 not classified & original description: pacid=50606194... 0.03 OrthoFinder output from all 47 species
Ceric.29G024800.1 Ceric.29G024800 not classified & original description: pacid=50625545... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07775 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g14112 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g03347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06094 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06634 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07701 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14541 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g25822 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01747 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21461 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo112044 No alias Pentatricopeptide repeat-containing protein At2g34400... 0.05 OrthoFinder output from all 47 species
Tin_g41566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 430 476
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 506 527
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 98 122
No external refs found!