Ala_g23788

Description : platform ATPase CDC48 & original description: none

Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g23788

Target	Alias	Description	ECC score	Gene Family Method
Als_g14973	No alias	platform ATPase CDC48 & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38557	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g38164	CDC48A, CDC48, ATCDC48	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G014100.1	Ceric.14G014100	platform ATPase CDC48 & original description:...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021463.11	CDC48A, CDC48, ATCDC48	Cell division control protein 48 homolog A...	0.01	OrthoFinder output from all 47 species
LOC_Os08g29680.1	LOC_Os08g29680	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os10g30580.1	LOC_Os10g30580	platform ATPase (CDC48)	0.03	OrthoFinder output from all 47 species
Solyc10g084050.2.1	Solyc10g084050	platform ATPase (CDC48)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041569	AAA_lid_3	235	277
IPR041569	AAA_lid_3	511	552
IPR003959	ATPase_AAA_core	356	489
IPR003959	ATPase_AAA_core	83	212

External Links

No external refs found!