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  5. Ala_g23933

Ala_g23933


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g23933

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g014360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30566 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g17880 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene04185.t1 Aspi01Gene04185 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11318.t1 CRR22, Aspi01Gene11318 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000557 OTP86 not classified & original description: CDS=1-2739 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.06 OrthoFinder output from all 47 species
Azfi_s0032.g024865 No alias not classified & original description: CDS=234-3254 0.04 OrthoFinder output from all 47 species
Azfi_s0127.g048709 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-2400 0.07 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.06 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.06 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.06 OrthoFinder output from all 47 species
Cba_g67785 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.04G018200.1 OTP84, Ceric.04G018200 not classified & original description: pacid=50630783... 0.04 OrthoFinder output from all 47 species
Ceric.04G103900.1 Ceric.04G103900 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.19G069600.1 Ceric.19G069600 not classified & original description: pacid=50575437... 0.05 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.04 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.28 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g05441 RARE1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g05532 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g18577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35258 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28912 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01003124001 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.05 OrthoFinder output from all 47 species
GSVIVT01010869001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
GSVIVT01012206001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.05 OrthoFinder output from all 47 species
LOC_Os02g46980.1 LOC_Os02g46980 Pentatricopeptide repeat-containing protein At1g31920... 0.02 OrthoFinder output from all 47 species
LOC_Os03g43420.1 OSB1, LOC_Os03g43420 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Len_g25825 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g26141 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.05 OrthoFinder output from all 47 species
MA_935792g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.07 OrthoFinder output from all 47 species
Msp_g10059 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g18639 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g44115 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06160 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21521 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38636 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12671 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29175 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12215 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57540 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57980 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63879 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.02 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g14452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001030 No alias not classified & original description: CDS=1-1857 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015038 CRR22 not classified & original description: CDS=1-1620 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0065.g016059 No alias not classified & original description: CDS=25-3486 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019309 No alias not classified & original description: CDS=1-1605 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019397 No alias not classified & original description: CDS=1-2220 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Sam_g02933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06558 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g52122 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.03 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.04 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05225 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35364 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 481 528
IPR002885 Pentatricopeptide_repeat 380 426
IPR002885 Pentatricopeptide_repeat 456 476
IPR002885 Pentatricopeptide_repeat 282 312
IPR002885 Pentatricopeptide_repeat 153 175
IPR002885 Pentatricopeptide_repeat 180 210
IPR002885 Pentatricopeptide_repeat 354 374
IPR002885 Pentatricopeptide_repeat 47 73
No external refs found!