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  5. Ala_g24733

Ala_g24733


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g24733

Target Alias Description ECC score Gene Family Method Actions
Als_g05057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02232 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16119 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g26688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28526 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28721 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g29706 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68112 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10344 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18031 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26306 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04645 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09427 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g17869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25072 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g31189 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06522 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 139 161
IPR002885 Pentatricopeptide_repeat 37 60
IPR002885 Pentatricopeptide_repeat 340 362
IPR002885 Pentatricopeptide_repeat 464 493
IPR002885 Pentatricopeptide_repeat 538 559
IPR002885 Pentatricopeptide_repeat 563 611
IPR002885 Pentatricopeptide_repeat 164 211
IPR002885 Pentatricopeptide_repeat 267 313
IPR002885 Pentatricopeptide_repeat 62 109
No external refs found!