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  5. Ala_g25187

Ala_g25187


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00106p00092510 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
AT2G36710 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G18990 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G47500 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G55590 QRT1 Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g046688 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g127146 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g10289 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11634 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12101 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12395 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04970 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02507 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06584 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20602 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30459 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05718.t1 Aspi01Gene05718 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07325.t1 Aspi01Gene07325 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16842.t2 Aspi01Gene16842 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20189.t1 Aspi01Gene20189 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24083.t2 Aspi01Gene24083 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30602.t1 Aspi01Gene30602 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene71978.t1 Aspi01Gene71978 pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g05738 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11546 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G008900.1 Ceric.03G008900 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.05G031400.1 Ceric.05G031400 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G071300.1 Ceric.10G071300 pectin methylesterase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G076400.1 Ceric.10G076400 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.11G006600.1 Ceric.11G006600 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G045300.1 Ceric.15G045300 not classified & original description: pacid=50640021... 0.03 OrthoFinder output from all 47 species
Ceric.24G024700.1 Ceric.24G024700 pectin methylesterase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.29G054600.1 Ceric.29G054600 pectin methylesterase & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g05020 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09998 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11820 No alias EC_3.1 hydrolase acting on ester bond & original... 0.04 OrthoFinder output from all 47 species
Dcu_g06266 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g11350 No alias pectin methylesterase & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g11351 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11729 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g42904 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g44261 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g51244 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g13696 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25225 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g27753 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g06587 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08073 QRT1 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09632 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09802 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12103 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12392 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12393 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14386 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15499 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18839 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19236 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009729001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01023786001 ATPE11, PE11 Cell wall.pectin.homogalacturonan.modification and... 0.05 OrthoFinder output from all 47 species
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 OrthoFinder output from all 47 species
Gb_17798 No alias pectin methylesterase 0.06 OrthoFinder output from all 47 species
Gb_27225 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
LOC_Os01g19440.1 LOC_Os01g19440 pectin methylesterase 0.03 OrthoFinder output from all 47 species
LOC_Os05g44600.1 LOC_Os05g44600 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Len_g02282 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Len_g07516 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Len_g15122 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g19805 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10267810g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_10428610g0010 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
MA_14449g0010 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp2g01420.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp2g19430.1 No alias pectin methylesterase 0.02 OrthoFinder output from all 47 species
Mp3g01170.1 No alias pectin methylesterase 0.04 OrthoFinder output from all 47 species
Mp5g03920.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Mp5g03930.1 No alias pectin methylesterase 0.03 OrthoFinder output from all 47 species
Nbi_g00669 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03614 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g08076 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13021 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13329 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14686 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g30255 No alias pectin methylesterase & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06428 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15493 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19023 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25737 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27386 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29702 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30829 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32792 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g39490 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01612 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Pp3c16_19430V3.1 Pp3c16_19430 Pectin lyase-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g14779 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24799 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g25901 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g29894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31507 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63851 No alias pectin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010091 No alias pectin methylesterase & original description: CDS=1-882 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015880 No alias pectin methylesterase & original description: CDS=354-1487 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0104.g020122 No alias not classified & original description: CDS=269-877 0.04 OrthoFinder output from all 47 species
Sam_g16125 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Sam_g38210 No alias EC_3.1 hydrolase acting on ester bond & original... 0.02 OrthoFinder output from all 47 species
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 OrthoFinder output from all 47 species
Solyc02g075620.4.1 Solyc02g075620 pectin methylesterase 0.03 OrthoFinder output from all 47 species
Solyc05g053680.1.1 Solyc05g053680 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Solyc07g043240.4.1 Solyc07g043240 pectin methylesterase 0.04 OrthoFinder output from all 47 species
Solyc07g065350.2.1 QRT1, Solyc07g065350 pectin methylesterase 0.02 OrthoFinder output from all 47 species
Spa_g07165 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10100 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29457 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31270 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g37234 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38344 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49902 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54581 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g54582 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g01655 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07049 No alias pecTin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15602 No alias pecTin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19866 No alias pecTin methylesterase & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g20547 No alias pecTin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36990 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g36991 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e027944_P002 ATPE11, PE11,... pectin methylesterase 0.03 OrthoFinder output from all 47 species
Zm00001e035522_P001 QRT1, Zm00001e035522 pectin methylesterase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 91 377
No external refs found!