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  5. Ala_g25417

Ala_g25417


Description : not classified & original description: none


Gene families : OG0000604 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000604_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25417
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00176p00042540 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G14820 No alias Sec14p-like phosphatidylinositol transfer family protein 0.03 OrthoFinder output from all 47 species
Aev_g17988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63687.t1 Aspi01Gene63687 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0107.g045122 No alias not classified & original description: CDS=521-1126 0.03 OrthoFinder output from all 47 species
Azfi_s0323.g064545 No alias not classified & original description: CDS=311-997 0.03 OrthoFinder output from all 47 species
Len_g09580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426206g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g24089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005280.3.1 Solyc01g005280 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc03g118150.3.1 Solyc03g118150 Phosphatidylinositol/phosphatidylcholine transfer... 0.05 OrthoFinder output from all 47 species
Solyc06g068800.3.1 Solyc06g068800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g26743 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38415 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47796 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011650_P001 Zm00001e011650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001251 CRAL-TRIO_dom 145 291
No external refs found!