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  5. Ala_g25979

Ala_g25979


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g25979

Target Alias Description ECC score Gene Family Method Actions
Adi_g005224 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18317 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21708 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g32627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49175 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10215 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14055 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18332 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g24623 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28688 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33058 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42015.t1 Aspi01Gene42015 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13786 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g34736 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g12787 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g16528 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16394 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g40545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.04 OrthoFinder output from all 47 species
Len_g05389 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g40138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10436932g0010 No alias ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Msp_g17699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20793 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09076 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18475 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43995 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 800 846
IPR002885 Pentatricopeptide_repeat 395 441
IPR002885 Pentatricopeptide_repeat 698 744
IPR002885 Pentatricopeptide_repeat 293 340
IPR002885 Pentatricopeptide_repeat 598 644
IPR002885 Pentatricopeptide_repeat 195 240
IPR002885 Pentatricopeptide_repeat 496 539
IPR002885 Pentatricopeptide_repeat 169 193
IPR002885 Pentatricopeptide_repeat 876 898
IPR002885 Pentatricopeptide_repeat 268 292
IPR002885 Pentatricopeptide_repeat 570 596
IPR002885 Pentatricopeptide_repeat 774 799
No external refs found!