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  5. Ala_g26452

Ala_g26452 (TTL1)


Aliases : TTL1

Description : not classified & original description: none


Gene families : OG0000939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000939_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g26452
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Aev_g37899 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06190 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16305 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40020 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10921 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g13784 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g14242 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g01798 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g15649 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22529 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22590 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g48474 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04986 TTL3, VIT not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005875001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01009014001 TPR14 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01014216001 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_36115 TTL1 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species
Len_g09795 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Mp6g04200.1 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g35116 TTL1 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Msp_g42710 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07534 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g09362 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21517 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29036 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01359 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g02414 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17078 TTL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001174 TTL1 not classified & original description: CDS=524-3337 0.04 OrthoFinder output from all 47 species
Smo168306 TTL1 TPR repeat-containing thioredoxin TTL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g04571 TTL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09257 TTL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16173 TTL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10854 TTL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14806 TTL1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e023863_P001 TPR14, Zm00001e023863 Inactive TPR repeat-containing thioredoxin TTL3... 0.03 OrthoFinder output from all 47 species
Zm00001e027870_P001 TTL1, Zm00001e027870 scaffold protein (TTL) of brassinosteroid signalling 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 860 946
No external refs found!