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  5. Ala_g26879

Ala_g26879


Description : RING-H2-class BTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g26879

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00043520 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Adi_g020451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g044893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066616 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Als_g04416 RHC1A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24805 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.35G016600.1 Ceric.35G016600 not classified & original description: pacid=50582007... 0.03 OrthoFinder output from all 47 species
Dac_g04251 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g05540 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dde_g08219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g01127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g30061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g42700.1 LOC_Os06g42700 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g20588 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g05536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_126211g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_170709g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Ore_g03817 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g44777 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pnu_g13986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g06799 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Smo18753 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Spa_g05316 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 196 238
IPR039525 RNF126-like_zinc-ribbon 7 38
No external refs found!