Aliases : ATEXPA10, AT-EXP10, ATEXP10, EXPA10, EXP10, ATHEXP ALPHA 1.1
Description : alpha-class expansin & original description: none
Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g27552 | |
| Cluster | HCCA: Cluster_65 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00115760 | ATEXP7, EXPA7,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00072p00134750 | EXPA8, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00077p00063420 | EXPA8, ATHEXP... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00110p00103570 | ATEXPA4, ATEXP4,... | Expansin-A4 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00168p00074090 | evm_27.TU.AmTr_v1... | No description available | 0.04 | OrthoFinder output from all 47 species | |
| AT2G20750 | EXPB1, ATEXPB1,... | expansin B1 | 0.03 | OrthoFinder output from all 47 species | |
| AT4G01630 | ATHEXP ALPHA... | expansin A17 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G38400 | ATEXPL2, EXPL2,... | expansin-like A2 | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07935 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07936 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene00428.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene00429.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45684.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene51050.t1 | EXP15, ATEXPA15,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58001.t1 | EXPA8, ATHEXP... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene58043.t1 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene59827.t1 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0031.g024480 | ATEXPA1, EXP1,... | alpha-class expansin & original description: CDS=166-945 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025583 | No alias | alpha-class expansin & original description: CDS=1111-1770 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037864 | ATEXPA10,... | alpha-class expansin & original description: CDS=20-1057 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s1837.g107352 | EXPA8, ATHEXP... | not classified & original description: CDS=1-687 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.02G091400.1 | EXP15, ATEXPA15,... | alpha-class expansin & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G026000.1 | ATEXPA10,... | alpha-class expansin & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g06716 | ATEXPA3, EXP3,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g14223 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01005915001 | ATHEXP BETA 3.1,... | Cell wall.cell wall proteins.expansins.beta-like-type expansin | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01023857001 | ATEXPA20,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01028474001 | ATEXPA25,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_01500 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Gb_01502 | EXPA8, ATHEXP... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g60720.1 | LOC_Os03g60720 | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| MA_10020g0010 | ATEXPA10,... | alpha-class expansin | 0.06 | OrthoFinder output from all 47 species | |
| MA_104065g0020 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| MA_40671g0010 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g26880.1 | ATEXPA4, ATEXP4,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g06560.1 | EXPA16, ATHEXP... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g24717 | ATEXPA10,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13752 | ATEXPA10,... | alpha-class expansin & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g22080 | EXPB3, ATEXPB3,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c7_25830V3.1 | EXPB3, ATEXPB3,... | expansin B3 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g30591 | EXPA16, ATHEXP... | alpha-class expansin & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0033.g011032 | EXPA2, ATHEXP... | alpha-class expansin & original description: CDS=691-1200 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0103.g019980 | ATEXPA4, ATEXP4,... | alpha-class expansin & original description: CDS=1-819 | 0.04 | OrthoFinder output from all 47 species | |
| Smo179212 | ATEXPA10,... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g088100.3.1 | ATEXPA10,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g060970.2.1 | ATHEXP BETA 3.1,... | beta-like-class expansin | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g010860.4.1 | ATEXPA3, EXP3,... | alpha-class expansin | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g084780.3.1 | EXP9, EXPA9,... | alpha-class expansin | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54039 | ATEXPA1, EXP1,... | alpha-class expansin & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036860_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036907_P001 | ATHEXP BETA 1.4,... | Putative expansin-B14 OS=Oryza sativa subsp. japonica... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| No external refs found! |
