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  5. Ala_g27616

Ala_g27616


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g27616

Target Alias Description ECC score Gene Family Method Actions
Aev_g03142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene20612.t1 Aspi01Gene20612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33568.t2 Aspi01Gene33568 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G087300.1 Ceric.01G087300 not classified & original description: pacid=50591762... 0.03 OrthoFinder output from all 47 species
Dde_g01519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g25020.1 LOC_Os11g25020 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_15472g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_29449g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Nbi_g34113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003040 No alias not classified & original description: CDS=1-1485 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008363 No alias not classified & original description: CDS=285-1409 0.05 OrthoFinder output from all 47 species
Solyc02g078160.3.1 Solyc02g078160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g12767 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g15489 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14496 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 23 252
No external refs found!