Ala_g27636 (TMO6)

Aliases : TMO6

Description : transcription factor *(DOF) & original description: none

Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Ala_g27636

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00099150	CDF2,...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	OrthoFinder output from all 47 species
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.04	OrthoFinder output from all 47 species
Azfi_s1074.g096912	TMO6	transcription factor *(DOF) & original description: CDS=1-1176	0.03	OrthoFinder output from all 47 species
Ceric.22G032900.1	TMO6, Ceric.22G032900	transcription factor *(DOF) & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g10863	DOF2.4, ATDOF2.4	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g12722	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g15900.1	CDF2, LOC_Os01g15900	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
LOC_Os07g32510.1	TMO6, LOC_Os07g32510	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Len_g13575	TMO6	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g41543	TMO6	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g48794	CDF3	transcription factor *(DOF) & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012148	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1128	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012351	ADOF1, DOF1	transcription factor *(DOF) & original description: CDS=1-1632	0.02	OrthoFinder output from all 47 species
Sam_g18370	No alias	transcription factor *(DOF) & original description: none	0.03	OrthoFinder output from all 47 species
Smo89924	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	OrthoFinder output from all 47 species
Solyc02g077950.3.1	Solyc02g077950	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g082840.3.1	DAG1, Solyc03g082840	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Solyc03g121400.1.1	ADOF2, DOF2,...	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Solyc06g075370.3.1	TMO6, Solyc06g075370	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species
Zm00001e004476_P002	Zm00001e004476	transcription factor (DOF)	0.05	OrthoFinder output from all 47 species
Zm00001e005107_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e012437_P001	ADOF1, DOF1,...	transcription factor (DOF)	0.03	OrthoFinder output from all 47 species
Zm00001e015414_P004	Zm00001e015414	transcription factor (DOF)	0.02	OrthoFinder output from all 47 species
Zm00001e020190_P001	Zm00001e020190	transcription factor (DOF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	165	221

External Links

No external refs found!

Ala_g27636 (TMO6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation