Description : component *(SPT20/ADA5) of SAGA transcription co-activator complex & original description: none
Gene families : OG0002206 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002206_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G72390 | No alias | CONTAINS InterPro DOMAIN/s: Spt20 family... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g085780 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g02622 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G072900.1 | Ceric.13G072900 | component *(SPT20/ADA5) of SAGA transcription... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01016716001 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g02860.1 | LOC_Os01g02860 | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g25200.1 | LOC_Os10g25200 | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07703 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g13242 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10436298g0010 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g19910.1 | No alias | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g37205 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g063010.4.1 | Solyc06g063010 | component SPT20/ADA5 of SAGA transcription co-activator complex | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g49888 | No alias | component *(SPT20/ADA5) of SAGA transcription... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| BP | GO:0016192 | vesicle-mediated transport | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0034450 | ubiquitin-ubiquitin ligase activity | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| No external refs found! |
