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  5. Ala_g28545

Ala_g28545


Description : not classified & original description: none


Gene families : OG0005941 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005941_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g28545
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Aev_g02985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02288 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g26041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19193 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g00497 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cre01.g007050 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g04077 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g49534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g58310.2 LOC_Os02g58310 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g22341 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_10429473g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g40030 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06365 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g05504 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000687 No alias not classified & original description: CDS=312-986 0.04 OrthoFinder output from all 47 species
Solyc04g009370.4.1 Solyc04g009370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g07180 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g00511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016279_P001 Zm00001e016279 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021420 DUF3067 114 205
No external refs found!