Aliases : BBM
Description : not classified & original description: none
Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ala_g28572 | |
| Cluster | HCCA: Cluster_79 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00086450 | ADAP,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00035p00205430 | AP2, FLO2, FL1,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00066p00028460 | BBM,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G20840 | PLT1 | Integrase-type DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g018198 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05705 | BBM | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g14197 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g15824 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g27594 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g06262 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g07209 | ADAP | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08912 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g10604 | TOE3 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g40928 | PLT2 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24152.t1 | PLT2, Aspi01Gene24152 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59204.t1 | Aspi01Gene59204 | RAM1-dependent transcription factor *(WRI5) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0207.g057931 | WRI1, ATWRI1, ASML1, WRI | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g06694 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g29361 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G056200.1 | PLT2, Ceric.10G056200 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.12G002600.1 | Ceric.12G002600 | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G068200.1 | AP2, FLO2, FL1,... | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G054600.1 | PLT2, Ceric.15G054600 | AP2-type transcription factor *(WRI/AIL) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.26G003300.1 | PLT2, Ceric.26G003300 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G036600.1 | Ceric.31G036600 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g36557 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06469 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g10360 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g12320 | PLT2 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g30317 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g42409 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18637 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016764001 | No alias | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01022081001 | AP2, FLO2, FL1 | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01025307001 | PLT2 | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g12950.1 | DRG, CKC, CKC1,... | no description available(sp|q84z02|crl5_orysj : 102.0) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g43220.1 | AP2, FLO2, FL1,... | transcription factor (AP2) | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os07g03250.1 | DRG, CKC, CKC1,... | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g03290.1 | WRI1, ATWRI1,... | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g29123 | AP2, FLO2, FL1 | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| MA_113625g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_31722g0010 | DRG, CKC, CKC1, ANT | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8090186g0010 | AP2, FLO2, FL1 | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| MA_95471g0010 | No alias | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g11450.1 | No alias | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28024 | BBM | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g09452 | BBM | AP2-type transcription factor *(WRI/AIL) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g25934 | PLT2 | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g37584 | WRI1, ATWRI1, ASML1, WRI | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g64020 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0024.g009098 | PLT2 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g05070 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13728 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g092050.3.1 | DRG, CKC, CKC1,... | transcription factor (AP2) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g123430.4.1 | Solyc03g123430 | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g008560.2.1 | BBM, Solyc11g008560 | transcription factor (AP2) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g072600.3.1 | RAP2.7, TOE1,... | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010490.3.1 | ADAP, Solyc12g010490 | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g07247 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10568 | BBM | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g10618 | No alias | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31835 | PLT2 | AP2-type transcription factor *(WRI/AIL) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e015104_P001 | PLT2, Zm00001e015104 | transcription factor (AP2) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e018951_P001 | PLT2, Zm00001e018951 | transcription factor (AP2) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019489_P001 | WRI1, ATWRI1,... | transcription factor (AP2) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006820 | monoatomic anion transport | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
