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  5. Ala_g30011

Ala_g30011 (UBP23)


Aliases : UBP23

Description : deubiquitinase *(UBP23) & original description: none


Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g30011

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00168980 UBP25,... Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
AT1G17110 UBP15 ubiquitin-specific protease 15 0.02 OrthoFinder output from all 47 species
Aev_g09377 UBP23 deubiquitinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G085100.1 UBP23, Ceric.03G085100 deubiquitinase *(UBP23) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G035800.1 UBP19, Ceric.15G035800 deubiquitinase *(UBP15-21) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G067600.1 UBP23, Ceric.28G067600 deubiquitinase *(UBP23) & original description:... 0.03 OrthoFinder output from all 47 species
Cre16.g648600 UBP19 No description available 0.02 OrthoFinder output from all 47 species
Dcu_g03145 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014079001 UBP23 Protein degradation.peptidase families.cysteine-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01033166001 UBP18 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
GSVIVT01038082001 UBP25 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
LOC_Os08g37350.1 UBP17, LOC_Os08g37350 deubiquitinase (UBP15-21) 0.03 OrthoFinder output from all 47 species
Lfl_g11163 UBP25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429414g0020 UBP18 deubiquitinase (UBP15-21) 0.02 OrthoFinder output from all 47 species
Ore_g29641 UBP25 deubiquitinase *(UBP25) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01994 UBP23 deubiquitinase *(UBP23) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02570 UBP18 deubiquitinase *(UBP15-21) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05280 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08769 UBP25 deubiquitinase *(UBP25) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g04367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420048 UBP18 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Spa_g12821 UBP25 deubiquitinase *(UBP25) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01115 UBP23 deubiquiTinase *(UBP23) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e027381_P003 UBP25, Zm00001e027381 deubiquitinase (UBP25) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008312 7S RNA binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
CC GO:0048500 signal recognition particle IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 106 404
No external refs found!