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  5. Lfl_g03006

Lfl_g03006


Description : transcription factor *(DOF) & original description: none


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03006

Target Alias Description ECC score Gene Family Method Actions
AT5G39660 CDF2 cycling DOF factor 2 0.02 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03156 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27376 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47633 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43230.t1 OBP4, Aspi01Gene43230 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53704.t1 ADOF1, DOF1,... transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68681.t1 OBP4, Aspi01Gene68681 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04480 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19275 CDF3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g71501 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g72531 CDF2 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07633 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25853 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16037 ADOF2, DOF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
MA_123810g0010 OBP4 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
MA_459791g0010 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
MA_83624g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Msp_g01078 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03486 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33176 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44057 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10735 OBP3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14293 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26562 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07474 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16493 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g088070.3.1 CDF3, Solyc02g088070 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Solyc05g007880.4.1 CDF1, Solyc05g007880 Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc09g010680.3.1 Solyc09g010680 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
Spa_g12133 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10128 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10425 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e012437_P001 ADOF1, DOF1,... transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006812 monoatomic cation transport IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 57 113
No external refs found!