Aliases : ATO
Description : component *(SF3A3) of splicing factor 3A complex & original description: none
Gene families : OG0005469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005469_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aob_g07243 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.22G050500.1 | ATO, Ceric.22G050500 | component *(SF3A3) of splicing factor 3A complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000912.17 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g297750 | ATO | RNA processing.RNA splicing.U2-type-intron-specific... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g50850.1 | ATO, LOC_Os03g50850 | component SF3A3 of splicing factor 3A complex | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g20400.1 | ATO | component SF3A3 of splicing factor 3A complex | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g06064 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g14896 | ATO | component *(SF3A3) of splicing factor 3A complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g083430.3.1 | ATO, Solyc03g083430 | component SF3A3 of splicing factor 3A complex | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEA | Interproscan |
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| CC | GO:0005681 | spliceosomal complex | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005643 | nuclear pore | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006298 | mismatch repair | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030983 | mismatched DNA binding | IEP | HCCA |
| MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| No external refs found! |
