Ala_g30817


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g30817

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00110050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Adi_g004489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g098115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01931 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06555 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09136 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g10827 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g12178 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13994 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g14691 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16831 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g16833 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17267 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17285 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17629 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g18613 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g18745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20130 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g22010 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24083 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24238 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24239 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24716 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25601 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27165 MEF19 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g27276 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30727 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g30878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31179 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g31741 SLO1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g32674 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33357 OTP86 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g36192 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36194 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g36518 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g37714 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g39531 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g68954 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24992 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016874001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01029254001 OSB4 RNA biosynthesis.organelle machineries.RNA polymerase... 0.08 OrthoFinder output from all 47 species
Msp_g34215 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02568 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06417 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 38 64
IPR002885 Pentatricopeptide_repeat 97 144
No external refs found!