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  5. Ala_g31195

Ala_g31195


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g31195

Target Alias Description ECC score Gene Family Method Actions
AT3G16610 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
Adi_g002450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003199 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g021159 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g048224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g05316 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12663 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17643 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g21042 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23930 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57094 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28685 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10220.t1 OTP84, Aspi01Gene10220 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23472.t1 CRR22, Aspi01Gene23472 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.03 OrthoFinder output from all 47 species
Azfi_s0292.g063377 OTP86 not classified & original description: CDS=1-2337 0.03 OrthoFinder output from all 47 species
Cba_g29994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G036800.1 Ceric.04G036800 not classified & original description: pacid=50632550... 0.03 OrthoFinder output from all 47 species
Ceric.04G095300.1 OTP84, Ceric.04G095300 not classified & original description: pacid=50630887... 0.04 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.03 OrthoFinder output from all 47 species
Ceric.22G077500.1 Ceric.22G077500 not classified & original description: pacid=50615168... 0.04 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.03 OrthoFinder output from all 47 species
Ceric.23G060300.1 CRR22, Ceric.23G060300 not classified & original description: pacid=50610371... 0.03 OrthoFinder output from all 47 species
Ceric.25G022800.1 Ceric.25G022800 not classified & original description: pacid=50594192... 0.03 OrthoFinder output from all 47 species
Ceric.27G018200.1 Ceric.27G018200 not classified & original description: pacid=50604999... 0.03 OrthoFinder output from all 47 species
Ceric.39G046500.1 Ceric.39G046500 not classified & original description: pacid=50582543... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021035.24 No alias Pentatricopeptide repeat-containing protein At1g63080,... 0.02 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07737 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26799 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35692 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47860 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03570 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17418 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g32892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10694 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10317671g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14956 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g40202 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010154 No alias not classified & original description: CDS=1-2595 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015358 No alias not classified & original description: CDS=223-2631 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015808 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0215.g026034 OTP84 not classified & original description: CDS=2081-4369 0.03 OrthoFinder output from all 47 species
Sam_g07050 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo173139 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Smo180422 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc08g013850.1.1 CRR21, Solyc08g013850 RNA editing factor (CRR21) 0.02 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17160 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53336 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10964 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30132 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30444 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029186_P001 Zm00001e029186 Pentatricopeptide repeat-containing protein At1g19720... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 152 175
IPR002885 Pentatricopeptide_repeat 560 583
IPR002885 Pentatricopeptide_repeat 80 108
IPR046848 E_motif 603 646
IPR002885 Pentatricopeptide_repeat 381 428
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 485 531
IPR002885 Pentatricopeptide_repeat 279 326
No external refs found!