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  5. Ala_g32400

Ala_g32400


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g32400
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30357 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g33127 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50715 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g21301 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27606.t1 Aspi01Gene27606 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55008.t1 Aspi01Gene55008 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55009.t1 Aspi01Gene55009 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68852.t1 Aspi01Gene68852 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59888 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z042600.1 Ceric.1Z042600 2S globulin seed storage protein & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.1Z043300.1 Ceric.1Z043300 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z063200.1 Ceric.1Z063200 2S globulin seed storage protein & original description:... 0.07 OrthoFinder output from all 47 species
Ceric.1Z224900.1 Ceric.1Z224900 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g07283 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36690 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025078001 No alias Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g43213 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50581 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g30068 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15826 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32505 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g39731 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g13030 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61907 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021703 No alias 2S globulin seed storage protein & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g40975 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10934 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36586 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004770_P001 Zm00001e004770 no description available(sp|q7m443|chit2_tulsb : 315.0) 0.04 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 30 72
IPR018392 LysM_dom 88 130
IPR001223 Glyco_hydro18_cat 221 375
No external refs found!