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  4. Sequence
  5. Ala_g32630

Ala_g32630


Description : regulatory protein *(CORD) of cortical microtubule organisation & original description: none


Gene families : OG0001085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001085_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g32630
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00183470 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Als_g14422 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Als_g15838 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Als_g34014 No alias regulatory protein *(CORD) of cortical microtubule... 0.02 OrthoFinder output from all 47 species
Aop_g11292 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Azfi_s0068.g036349 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Ceric.02G008100.1 Ceric.02G008100 regulatory protein *(CORD) of cortical microtubule... 0.06 OrthoFinder output from all 47 species
GSVIVT01015437001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_38624 No alias regulatory protein (CORD) of cortical microtubule organisation 0.04 OrthoFinder output from all 47 species
LOC_Os11g02740.1 LOC_Os11g02740 regulatory protein (CORD) of cortical microtubule organisation 0.05 OrthoFinder output from all 47 species
LOC_Os12g02710.1 LOC_Os12g02710 regulatory protein (CORD) of cortical microtubule organisation 0.04 OrthoFinder output from all 47 species
Len_g03904 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Lfl_g39733 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
MA_8827g0010 No alias regulatory protein (CORD) of cortical microtubule organisation 0.04 OrthoFinder output from all 47 species
Mp5g18740.1 No alias regulatory protein (CORD) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Msp_g14571 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Msp_g15670 No alias regulatory protein *(CORD) of cortical microtubule... 0.07 OrthoFinder output from all 47 species
Nbi_g10387 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Nbi_g25831 No alias regulatory protein *(CORD) of cortical microtubule... 0.03 OrthoFinder output from all 47 species
Ppi_g12415 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0111.g020683 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Solyc03g122080.3.1 Solyc03g122080 regulatory protein (CORD) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Solyc12g007020.2.1 Solyc12g007020 regulatory protein (CORD) of cortical microtubule organisation 0.07 OrthoFinder output from all 47 species
Spa_g44766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47771 No alias regulatory protein *(CORD) of cortical microtubule... 0.04 OrthoFinder output from all 47 species
Tin_g44365 No alias regulatory protein *(CORD) of cortical microtubule... 0.05 OrthoFinder output from all 47 species
Zm00001e003729_P002 Zm00001e003729 regulatory protein (CORD) of cortical microtubule organisation 0.03 OrthoFinder output from all 47 species
Zm00001e034715_P002 Zm00001e034715 regulatory protein (CORD) of cortical microtubule organisation 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR010341 DUF936_pln 4 865
No external refs found!