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  5. Ala_g33590

Ala_g33590 (PGP2)


Aliases : PGP2

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33590
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00109790 PGP11,... No description available 0.02 OrthoFinder output from all 47 species
AT3G55320 PGP20 P-glycoprotein 20 0.03 OrthoFinder output from all 47 species
AT3G62150 PGP21 P-glycoprotein 21 0.04 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.02 OrthoFinder output from all 47 species
Aev_g20043 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17861 ABCB19,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26381 No alias subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g27372 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36024 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18810 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18811 PGP11 subfamily ABCB transporter & original description: none 0.07 OrthoFinder output from all 47 species
Als_g22635 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08993 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36046 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene12320.t2 PGP2, Aspi01Gene12320 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43898.t1 PGP20, Aspi01Gene43898 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene46795.t1 PGP2, Aspi01Gene46795 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62054.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64232.t1 PGP11, Aspi01Gene64232 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G065900.1 PGP2, Ceric.18G065900 subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.35G032800.1 ABCB19,... subfamily ABCB transporter & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.38G058800.1 PGP2, Ceric.38G058800 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000025.2 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g38327 PGP9 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40826 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09158 PGP11 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29451 ABCB19,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g02960 PGP13 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013125001 PGP2 Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
GSVIVT01015306001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g18670.1 PGP21, LOC_Os01g18670 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os01g74470.1 PGP20, LOC_Os01g74470 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
LOC_Os02g46680.1 PGP2, LOC_Os02g46680 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os08g05710.1 ABCB14,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Len_g02924 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18141 PGP10 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g23455 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g47394 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57621 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03498 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10739 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g41280 PGP11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_102299g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
MA_10280832g0010 PGP11 ABC transporter B family member 7 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MA_111099g0010 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
MA_114017g0010 No alias subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
MA_79399g0010 No alias Putative multidrug resistance protein OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_93218g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g36979 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08816 ABCB19,... subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43029 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g49419 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57081 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_16450V3.1 ABCB19,... ATP binding cassette subfamily B19 0.02 OrthoFinder output from all 47 species
Ppi_g03992 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.03 OrthoFinder output from all 47 species
Sam_g38892 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48720 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Smo230688 ABCB19,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Smo419451 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc12g098840.3.1 PGP11, Solyc12g098840 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Spa_g26470 ABCB19,... subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06701 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08424 PGP11 subfamily ABCB transporter & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 30 300
IPR011527 ABC1_TM_dom 671 939
IPR003439 ABC_transporter-like_ATP-bd 370 519
IPR003439 ABC_transporter-like_ATP-bd 1009 1157
No external refs found!