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  5. Lfl_g03374

Lfl_g03374 (ATHB16, HB16, ATHB-16)


Aliases : ATHB16, HB16, ATHB-16

Description : regulatory protein *(LMI1) of floral meristem identity control & original description: none


Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03374
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT1G26960 AtHB23, HB23 homeobox protein 23 0.02 OrthoFinder output from all 47 species
Adi_g104185 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g03703 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.03 OrthoFinder output from all 47 species
Als_g05565 ATHB13 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g18491 ATHB1, ATHB-1,... regulatory protein *(LMI1) of floral meristem identity... 0.05 OrthoFinder output from all 47 species
Als_g57801 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009635 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g68678 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ceric.03G096000.1 ATHB5, ATHB-5,... HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000789.4 HAT14 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Dcu_g15833 ATHB16, HB16, ATHB-16 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Dde_g17794 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10606 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Gb_07295 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g54666 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g20942 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g44127 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ore_g03346 HB6, ATHB6 regulatory protein *(LMI1) of floral meristem identity... 0.02 OrthoFinder output from all 47 species
Ore_g07340 HB6, ATHB6 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g54343 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013473 ATHB1, ATHB-1,... HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0066.g016153 ATHB3, HB-3, ATHB-3, HAT7 HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g07059 No alias HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g08141 No alias HD-ZIP I/II-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g24411 No alias HD-ZIP I/II-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g37807 No alias HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo18217 ATHB16, HB16, ATHB-16 RNA biosynthesis.transcriptional activation.HB... 0.02 OrthoFinder output from all 47 species
Solyc05g006980.3.1 ATHB1, ATHB-1,... transcription factor (HD-ZIP I/II) 0.03 OrthoFinder output from all 47 species
Spa_g21814 ATHB5, ATHB-5, HB5 HD-ZIP I/II-type transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 193 227
IPR001356 Homeobox_dom 138 191
No external refs found!