1. Home
  2. Species
  3. Adiantum latifolium
  4. Sequence
  5. Ala_g33936

Ala_g33936 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g33936

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 UNE12,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00138470 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
AT3G07340 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G36540 BEE2 BR enhanced expression 2 0.02 OrthoFinder output from all 47 species
Adi_g021895 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Adi_g085081 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14326 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g22777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28177 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Als_g28194 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g30603 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G069900.1 LRL3, Ceric.19G069900 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ehy_g05786 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05791 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_24992 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Len_g10068 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g26119 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_158850g0010 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g03137 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Nbi_g09354 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Nbi_g11730 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g44898 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10832 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_17000V3.1 LRL1, Pp3c17_17000 LJRHL1-like 1 0.01 OrthoFinder output from all 47 species
Ppi_g39212 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022767 LRL3 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026543 No alias bHLH-type transcription factor & original description: CDS=1-2082 0.03 OrthoFinder output from all 47 species
Sam_g28535 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo409967 ATRSL1, RSL1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Solyc01g010130.4.1 Solyc01g010130 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc04g005130.3.1 Solyc04g005130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Spa_g50491 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16970 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Zm00001e006042_P001 Zm00001e006042 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e034605_P003 Zm00001e034605 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 421 467
No external refs found!