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  5. Lfl_g03405

Lfl_g03405


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g03405
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT2G43140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g048072 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27168 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37127 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49316 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40845 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20728 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28112.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35112.t2 SPT, Aspi01Gene35112 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013709 LRL1 bHLH-type transcription factor & original description: CDS=1-1035 0.02 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.05 OrthoFinder output from all 47 species
Cba_g25008 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G038400.1 Ceric.16G038400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G051300.1 LRL3, Ceric.31G051300 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g18466 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01020814001 SRL2, PIF4, AtPIF4 External stimuli response.light.red/far red light.PIF... 0.02 OrthoFinder output from all 47 species
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68700.1 LOC_Os01g68700 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os03g58330.1 UNE12, LOC_Os03g58330 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g30090.1 RHD6, LOC_Os06g30090 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp3g17350.1 SPT transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp5g18910.1 HEC1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g08624 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g26946 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43162 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g43163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30747 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g097820.2.1 Solyc03g097820 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Solyc06g062460.3.1 Solyc06g062460 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc07g043580.4.1 PIL6, PIF5,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Spa_g22941 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002331_P003 UNE10, Zm00001e002331 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e005046_P003 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 468 514
No external refs found!