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  5. Ala_g35531

Ala_g35531


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g35531
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT3G25060 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G53360 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G20010 PTAC9, OSB2 plastid transcriptionally active 9 0.04 OrthoFinder output from all 47 species
Ala_g07993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16615 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17095 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g40645 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene68744.t1 Aspi01Gene68744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.05 OrthoFinder output from all 47 species
Ceric.36G033700.1 Ceric.36G033700 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g03480 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03997 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05920 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22021 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g42894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47826 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50292 SLO1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g43227 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04362 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g28575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57720 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63391 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63825 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g65274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.03 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Tin_g17737 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 191
IPR002885 Pentatricopeptide_repeat 471 493
IPR002885 Pentatricopeptide_repeat 400 428
IPR002885 Pentatricopeptide_repeat 370 395
IPR002885 Pentatricopeptide_repeat 97 127
IPR002885 Pentatricopeptide_repeat 299 327
IPR002885 Pentatricopeptide_repeat 571 594
IPR002885 Pentatricopeptide_repeat 199 227
IPR002885 Pentatricopeptide_repeat 773 796
IPR002885 Pentatricopeptide_repeat 599 629
No external refs found!