Ala_g35746


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g35746

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00230160 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00187000 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035521 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g061031 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g067033 CRR21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097074 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g17868 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13481 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17028 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18769 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19261 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19351 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22510 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11318.t1 CRR22, Aspi01Gene11318 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40416.t1 CRR22, Aspi01Gene40416 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0027.g023505 No alias not classified & original description: CDS=32-2620 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g030112 No alias not classified & original description: CDS=94-318 0.04 OrthoFinder output from all 47 species
Azfi_s1334.g101644 No alias not classified & original description: CDS=1-3543 0.04 OrthoFinder output from all 47 species
Azfi_s4317.g118724 No alias not classified & original description: CDS=1-465 0.04 OrthoFinder output from all 47 species
Cba_g05902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14062 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42997 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08698 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21468 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11730 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g21990 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g22625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g24679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28912 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021403001 No alias Pentatricopeptide repeat-containing protein At3g14730... 0.03 OrthoFinder output from all 47 species
LOC_Os01g28570.1 LOC_Os01g28570 Pentatricopeptide repeat-containing protein At3g49710... 0.03 OrthoFinder output from all 47 species
Len_g18308 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33085 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g43453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04862 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08907 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05803 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g07530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42136 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g53095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60423 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63661 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g65840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.02 OrthoFinder output from all 47 species
Ppi_g03881 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Spa_g02212 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20177 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56147 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56457 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g17464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e022253_P001 Zm00001e022253 Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0010959 regulation of metal ion transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051924 regulation of calcium ion transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:2001256 regulation of store-operated calcium entry IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 254 276
IPR002885 Pentatricopeptide_repeat 351 377
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 178 224
IPR002885 Pentatricopeptide_repeat 281 326
No external refs found!