Ala_g36007 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36007

Target Alias Description ECC score Gene Family Method Actions
Aev_g42176 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g03223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34782.t1 Aspi01Gene34782 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34788.t1 CRK8, Aspi01Gene34788 ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene34796.t1 EMB2758, Aspi01Gene34796 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52031.t2 Aspi01Gene52031 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11982 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30008 OTP84 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67470 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g05942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46464 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08191 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18041 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g38569 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03547 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04988 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27455 No alias not classified & original description: none 0.2 OrthoFinder output from all 47 species
Nbi_g27953 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39417 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56302 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002988 No alias not classified & original description: CDS=1-2412 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004227 No alias not classified & original description: CDS=1-2520 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004479 No alias not classified & original description: CDS=197-3106 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007046 No alias not classified & original description: CDS=1-2853 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018665 No alias not classified & original description: CDS=8-2563 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0252.g026781 No alias not classified & original description: CDS=1-2700 0.01 OrthoFinder output from all 47 species
Sam_g11266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 325
IPR002885 Pentatricopeptide_repeat 202 224
IPR002885 Pentatricopeptide_repeat 22 69
IPR002885 Pentatricopeptide_repeat 227 273
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 329 376
No external refs found!