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  5. Ala_g36185

Ala_g36185


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36185
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AT1G56690 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g001971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g010601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g015823 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g069206 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g086259 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13967 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16615 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38174 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07022 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18668 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26645 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g09402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0038.g026305 EMB2758 not classified & original description: CDS=1-1827 0.04 OrthoFinder output from all 47 species
Azfi_s0151.g053374 No alias ssDNA-binding protein *(OSB) & original description: CDS=217-2670 0.03 OrthoFinder output from all 47 species
Cba_g05254 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g69088 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G041400.1 Ceric.01G041400 not classified & original description: pacid=50592429... 0.04 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.03 OrthoFinder output from all 47 species
Ceric.09G007000.1 Ceric.09G007000 not classified & original description: pacid=50586983... 0.03 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G025700.1 VAC1, ECB2,... not classified & original description: pacid=50613326... 0.04 OrthoFinder output from all 47 species
Ceric.11G040900.1 Ceric.11G040900 not classified & original description: pacid=50596742... 0.05 OrthoFinder output from all 47 species
Ceric.13G039400.1 Ceric.13G039400 not classified & original description: pacid=50635903... 0.04 OrthoFinder output from all 47 species
Ceric.18G000100.1 CRR22, Ceric.18G000100 ssDNA-binding protein *(OSB) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.28G068900.1 Ceric.28G068900 not classified & original description: pacid=50570286... 0.05 OrthoFinder output from all 47 species
Ceric.29G048500.1 Ceric.29G048500 not classified & original description: pacid=50625078... 0.04 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.03 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.03 OrthoFinder output from all 47 species
Ceric.36G017300.1 Ceric.36G017300 not classified & original description: pacid=50568624... 0.03 OrthoFinder output from all 47 species
Ceric.36G060000.1 Ceric.36G060000 not classified & original description: pacid=50568455... 0.03 OrthoFinder output from all 47 species
Dac_g03211 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g41493 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07068 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19736 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32657 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32914 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39398 CRR21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17295 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09573 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04335 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g15833 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63890 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63898 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16308 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29483 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31176 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53966 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012842 CRR2 not classified & original description: CDS=114-1901 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0133.g022243 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g46568 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51690 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.03 OrthoFinder output from all 47 species
Spa_g09284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05629 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06631 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g22999 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26741 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 349 367
IPR002885 Pentatricopeptide_repeat 143 189
IPR002885 Pentatricopeptide_repeat 244 292
No external refs found!