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  5. Ala_g36226

Ala_g36226


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0000556 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36226
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.Trihelix... 0.03 OrthoFinder output from all 47 species
Als_g57836 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G031000.1 Ceric.03G031000 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.36G000200.1 Ceric.36G000200 Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04858 AT-GT2, GT2 Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12622 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27401 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026588001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 OrthoFinder output from all 47 species
Len_g19098 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06235 AT-GTL1, GTL1, AT-GTL2 Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
MA_79619g0010 No alias transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Msp_g06995 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60919 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Solyc11g005380.2.1 Solyc11g005380 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Spa_g51431 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 628 715
IPR044822 Myb_DNA-bind_4 251 337
No external refs found!