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  5. Ala_g36539

Ala_g36539


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36539

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00109240 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00046p00214930 CRR22,... Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
AT2G21090 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G19191 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G04780 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g007616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023583 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g036755 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g043409 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g072273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17771 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g34817 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05916 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07500 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19114 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26685 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30790 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g56884 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g05294 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06520 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37587 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g02808 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03740 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04440 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04618 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16850 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30400 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g32922 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g63624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34087.t1 OTP86, Aspi01Gene34087 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34895.t1 Aspi01Gene34895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41379.t1 Aspi01Gene41379 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71861.t1 CRR2, Aspi01Gene71861 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g012008 EMB2758 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012535 No alias not classified & original description: CDS=1-2328 0.04 OrthoFinder output from all 47 species
Azfi_s0035.g025537 No alias ssDNA-binding protein *(OSB) & original description: CDS=167-2242 0.03 OrthoFinder output from all 47 species
Azfi_s0049.g030899 No alias not classified & original description: CDS=1-2946 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035332 No alias not classified & original description: CDS=1-1728 0.05 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.04 OrthoFinder output from all 47 species
Azfi_s0162.g054179 No alias not classified & original description: CDS=1-2562 0.03 OrthoFinder output from all 47 species
Azfi_s0171.g055669 No alias not classified & original description: CDS=1-2286 0.03 OrthoFinder output from all 47 species
Azfi_s0221.g058730 No alias not classified & original description: CDS=1-747 0.04 OrthoFinder output from all 47 species
Azfi_s0257.g060586 No alias not classified & original description: CDS=1-3168 0.03 OrthoFinder output from all 47 species
Azfi_s0349.g066523 EMB2758 not classified & original description: CDS=141-2294 0.05 OrthoFinder output from all 47 species
Azfi_s0731.g084096 No alias not classified & original description: CDS=1-3909 0.03 OrthoFinder output from all 47 species
Cba_g03349 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37478 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g76849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G068300.1 CRR22, Ceric.04G068300 not classified & original description: pacid=50630217... 0.04 OrthoFinder output from all 47 species
Ceric.05G087100.1 Ceric.05G087100 not classified & original description: pacid=50579181... 0.03 OrthoFinder output from all 47 species
Ceric.06G074600.1 Ceric.06G074600 not classified & original description: pacid=50619733... 0.04 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.03 OrthoFinder output from all 47 species
Ceric.16G000100.1 REME1, Ceric.16G000100 not classified & original description: pacid=50589905... 0.04 OrthoFinder output from all 47 species
Ceric.17G076500.1 Ceric.17G076500 not classified & original description: pacid=50617139... 0.03 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.03 OrthoFinder output from all 47 species
Ceric.25G011600.1 Ceric.25G011600 not classified & original description: pacid=50594012... 0.03 OrthoFinder output from all 47 species
Ceric.28G015100.1 Ceric.28G015100 not classified & original description: pacid=50570923... 0.04 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.03 OrthoFinder output from all 47 species
Cre12.g483720 No alias Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
Dac_g05775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24515 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25031 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25885 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30415 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g32437 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45747 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04041 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21351 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g05340 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06009 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26396 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12939 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23836 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24813 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05438 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07380 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07787 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11894 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31355 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_82569g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Msp_g17250 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28092 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g44335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09711 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15408 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g17545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12907 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03395 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g11351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11788 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46650 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57077 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57944 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57995 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63208 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63597 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63642 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63818 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63866 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04692 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010161 No alias not classified & original description: CDS=1-2802 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012385 No alias not classified & original description: CDS=1-1908 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015571 No alias not classified & original description: CDS=1-1581 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016434 No alias not classified & original description: CDS=1-1746 0.02 OrthoFinder output from all 47 species
Sam_g07455 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo102603 CRR2 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo131170 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Spa_g06014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03145 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04725 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11783 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12193 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12955 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g14567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g14912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16670 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g16803 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g18426 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25192 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26455 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g29210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g31642 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35267 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35670 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 226 274
IPR002885 Pentatricopeptide_repeat 23 72
IPR002885 Pentatricopeptide_repeat 430 478
IPR002885 Pentatricopeptide_repeat 124 171
IPR002885 Pentatricopeptide_repeat 328 375
IPR002885 Pentatricopeptide_repeat 532 578
IPR002885 Pentatricopeptide_repeat 406 426
IPR002885 Pentatricopeptide_repeat 506 529
No external refs found!