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  5. Ala_g36544

Ala_g36544


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ala_g36544

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00127120 CRR22,... Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00062590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AT4G18520 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G09950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018966 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g032567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035608 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066620 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g098996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g15170 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g34109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g38156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05107 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12947 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66052.t1 Aspi01Gene66052 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016204 OTP84 not classified & original description: CDS=27-2648 0.03 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.02 OrthoFinder output from all 47 species
Azfi_s0082.g038719 No alias not classified & original description: CDS=1-2307 0.03 OrthoFinder output from all 47 species
Azfi_s0908.g092257 No alias not classified & original description: CDS=1-1875 0.03 OrthoFinder output from all 47 species
Cba_g03341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05974 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06580 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20647 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G112800.1 Ceric.04G112800 not classified & original description: pacid=50632583... 0.03 OrthoFinder output from all 47 species
Ceric.10G013000.1 EMB2758, Ceric.10G013000 not classified & original description: pacid=50613337... 0.02 OrthoFinder output from all 47 species
Ceric.10G069100.1 Ceric.10G069100 not classified & original description: pacid=50612724... 0.04 OrthoFinder output from all 47 species
Ceric.20G040700.1 Ceric.20G040700 not classified & original description: pacid=50566494... 0.03 OrthoFinder output from all 47 species
Ceric.27G067100.1 CRR22, Ceric.27G067100 not classified & original description: pacid=50605115... 0.02 OrthoFinder output from all 47 species
Ceric.31G026600.1 CRR22, Ceric.31G026600 not classified & original description: pacid=50574263... 0.04 OrthoFinder output from all 47 species
Dac_g02827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05782 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07051 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07152 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g07711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07746 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08508 MEF21 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23388 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g23638 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26858 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40966 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45932 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g49324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50041 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03997 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g08291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21320 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g23579 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23809 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36369 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01012201001 OTP82 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036207001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
LOC_Os03g32620.1 LOC_Os03g32620 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g24150.1 LOC_Os05g24150 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Len_g18938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03483 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07835 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11306 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g15674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30026 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32670 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g37537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.02 OrthoFinder output from all 47 species
MA_6511g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.02 OrthoFinder output from all 47 species
Msp_g15606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07600 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10444 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27543 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g08941 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22460 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40943 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12221 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57998 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53028 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59322 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002023 No alias not classified & original description: CDS=1-2592 0.03 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g13872 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g31130 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02170 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05541 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06449 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17143 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26770 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26898 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29860 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41856 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g45141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Zm00001e015440_P001 CRR22, Zm00001e015440 Pentatricopeptide repeat-containing protein At3g57430,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 322 347
IPR002885 Pentatricopeptide_repeat 626 652
IPR002885 Pentatricopeptide_repeat 144 190
IPR002885 Pentatricopeptide_repeat 348 394
IPR002885 Pentatricopeptide_repeat 450 496
IPR002885 Pentatricopeptide_repeat 245 292
IPR002885 Pentatricopeptide_repeat 552 599
No external refs found!