Lfl_g04016

Description : membrane-anchored lectin chaperone *(CNX) & original description: none

Gene families : OG0001202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001202_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g04016

Target	Alias	Description	ECC score	Gene Family Method
AT5G61790	CNX1, ATCNX1	calnexin 1	0.03	OrthoFinder output from all 47 species
LOC_Os04g32950.1	LOC_Os04g32950	lectin chaperone (CNX)	0.02	OrthoFinder output from all 47 species
Ore_g29964	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.02	OrthoFinder output from all 47 species
Pp3c3_15970V3.1	CNX1, ATCNX1, Pp3c3_15970	calnexin 1	0.02	OrthoFinder output from all 47 species
Pp3c3_15980V3.1	CNX1, ATCNX1, Pp3c3_15980	calnexin 1	0.02	OrthoFinder output from all 47 species
Sam_g30203	No alias	membrane-anchored lectin chaperone *(CNX) & original...	0.02	OrthoFinder output from all 47 species
Solyc03g118040.3.1	CNX1, ATCNX1,...	lectin chaperone (CNX)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005783	endoplasmic reticulum	IEA	Interproscan
BP	GO:0006457	protein folding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0051082	unfolded protein binding	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	HCCA
BP	GO:0009451	RNA modification	IEP	HCCA
MF	GO:0009982	pseudouridine synthase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016866	intramolecular transferase activity	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
MF	GO:0140662	ATP-dependent protein folding chaperone	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001580	Calret/calnex	26	379

External Links

No external refs found!