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  5. Lfl_g04129

Lfl_g04129


Description : component *(COG6) of COG (Conserved-Oligomeric Golgi) complex & original description: none


Gene families : OG0006382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04129
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00043100 evm_27.TU.AmTr_v1... Vesicle trafficking.target membrane tethering.COG... 0.03 OrthoFinder output from all 47 species
Adi_g020669 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Aev_g04050 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Ala_g03847 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Als_g01013 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Aop_g14598 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Cba_g02026 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Ceric.21G025900.1 Ceric.21G025900 component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.07 OrthoFinder output from all 47 species
Cre13.g587750 No alias Vesicle trafficking.target membrane tethering.COG... 0.03 OrthoFinder output from all 47 species
Dde_g04871 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Ehy_g03923 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
GSVIVT01013198001 No alias Vesicle trafficking.target membrane tethering.COG... 0.08 OrthoFinder output from all 47 species
Gb_06250 No alias component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g12460.1 LOC_Os03g12460 component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.11 OrthoFinder output from all 47 species
MA_82735g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g15380.1 No alias component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.12 OrthoFinder output from all 47 species
Ore_g09011 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0168.g024294 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Sam_g14936 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Smo183082 No alias Vesicle trafficking.target membrane tethering.COG... 0.08 OrthoFinder output from all 47 species
Solyc08g075440.4.1 Solyc08g075440 component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.12 OrthoFinder output from all 47 species
Spa_g11268 No alias component *(COG6) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Zm00001e000904_P002 Zm00001e000904 component COG6 of COG (Conserved-Oligomeric Golgi) complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
CC GO:0017119 Golgi transport complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR010490 COG6 30 701
No external refs found!