Aliases : ATSS4, SS4, SSIV
Description : starch synthase *(SS4) & original description: none
Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00033p00039610 | evm_27.TU.AmTr_v1... | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00189p00041140 | ATSS4, SS4,... | Carbohydrate metabolism.starch... | 0.02 | OrthoFinder output from all 47 species | |
| AT4G18240 | ATSS4, SS4, SSIV | starch synthase 4 | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g05532 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g25563 | ATSS4, SS4, SSIV | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g05131 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02255 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05284 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007652 | ATSS3, SS3 | starch synthase *(SS3) & original description: CDS=201-2645 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012741 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: CDS=57-2150 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G020900.1 | ATSS3, SS3,... | starch synthase *(SS3) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Cre13.g579598 | ATSS3, SS3 | Carbohydrate metabolism.starch... | 0.02 | OrthoFinder output from all 47 species | |
| Cre16.g663850 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g10971 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01991 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g50824 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g53310.1 | ATSS3, SS3,... | starch synthase (SSIII) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g49747 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g14910.1 | ATSS4, SS4, SSIV | starch synthase (SSIV) | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g08030.1 | ATSS4, SS4, SSIV | Probable starch synthase 4, chloroplastic/amyloplastic... | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g20000.1 | ATSS3, SS3 | starch synthase (SSIII) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g34784 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02313 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g07616 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g39876 | ATSS4, SS4, SSIV | starch synthase *(SS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005824 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: CDS=149-3475 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0224.g026292 | ATSS4, SS4, SSIV | not classified & original description: CDS=1-2052 | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g51042 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g51044 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g10367 | ATSS4, SS4, SSIV | starch synthase *(SS4) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17570 | ATSS3, SS3 | starch synthase *(SS3) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027473_P001 | ATSS4, SS4,... | starch synthase (SSIV) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e041682_P002 | ATSS3, SS3,... | starch synthase (SSIII) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016757 | glycosyltransferase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0004672 | protein kinase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006468 | protein phosphorylation | IEP | HCCA |
| BP | GO:0006810 | transport | IEP | HCCA |
| BP | GO:0006826 | iron ion transport | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| BP | GO:0030001 | metal ion transport | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051179 | localization | IEP | HCCA |
| BP | GO:0051234 | establishment of localization | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| BP | GO:0098655 | monoatomic cation transmembrane transport | IEP | HCCA |
| BP | GO:0098660 | inorganic ion transmembrane transport | IEP | HCCA |
| BP | GO:0098662 | inorganic cation transmembrane transport | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| No external refs found! |
