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  5. Lfl_g04441

Lfl_g04441 (ATARFA1F, ARFA1F)


Aliases : ATARFA1F, ARFA1F

Description : ARF-GTPase *(ARF1) & original description: none


Gene families : OG0000301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000301_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04441

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00204p00014880 ATARFA1F,... Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 OrthoFinder output from all 47 species
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.02 OrthoFinder output from all 47 species
AT3G62290 ARFA1E, ATARFA1E ADP-ribosylation factor A1E 0.03 OrthoFinder output from all 47 species
Adi_g009714 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g009716 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110620 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12102 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31131 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07482 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68389 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021127.129 ARFA1E, ATARFA1E Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 OrthoFinder output from all 47 species
Dac_g05473 ATARFA1F, ARFA1F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09806 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30050 No alias ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07364 ARF1A1C ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g47110.2 ATARFB1B,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os05g41060.1 ATARFA1F,... ARF-GTPase 0.02 OrthoFinder output from all 47 species
Len_g04178 ATARFB1B, ARFB1B ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23069 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31478 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.05 OrthoFinder output from all 47 species
MA_4349g0020 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
MA_7293641g0010 ATARFB1B, ARFB1B ADP-ribosylation factor 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Mp3g13920.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Mp7g13050.1 ATARFA1F, ARFA1F ARF-GTPase 0.02 OrthoFinder output from all 47 species
Msp_g25108 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41323 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15523 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15667 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06306 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02984 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c12_14940V3.1 ARFA1E,... ADP-ribosylation factor A1E 0.02 OrthoFinder output from all 47 species
Sam_g19064 No alias ARF-GTPase *(ARFA) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29324 ATARFA1B, ARFA1B ARF-GTPase *(ARF1) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02993 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05371 ATARFA1F, ARFA1F ARF-GTPase *(ARF1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 5 177
No external refs found!