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  5. Lfl_g04524

Lfl_g04524 (ATVAMP725, VAMP725)


Aliases : ATVAMP725, VAMP725

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04524
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
AT1G04760 VAMP726, ATVAMP726 vesicle-associated membrane protein 726 0.02 OrthoFinder output from all 47 species
Als_g06684 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g12135 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Als_g13761 ATVAMP725, VAMP725 R-type VAMP7-group component of SNARE longin membrane... 0.04 OrthoFinder output from all 47 species
Als_g31575 VAMP726, ATVAMP726 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Ceric.36G052600.1 ATVAMP725,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Cre04.g225900 ATVAMP725, VAMP725 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
LOC_Os03g06960.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Nbi_g05177 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Ore_g04687 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Solyc02g069150.3.1 ATVAMP721,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
Solyc12g098180.3.1 VAMP726,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 111
IPR042855 V_SNARE_CC 128 214
No external refs found!