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  5. Lfl_g04972

Lfl_g04972


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g04972
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene54043.t1 Aspi01Gene54043 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G078800.1 Ceric.22G078800 not classified & original description: pacid=50613807... 0.04 OrthoFinder output from all 47 species
Dde_g04286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.04 OrthoFinder output from all 47 species
LOC_Os04g02850.1 OTP84, LOC_Os04g02850 RNA editing factor (OTP84) 0.03 OrthoFinder output from all 47 species
Len_g43453 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06304 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33764 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g49012 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011851 OTP84 not classified & original description: CDS=1-2175 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014697 OTP86 not classified & original description: CDS=1-2199 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015808 No alias EC_2.5 transferase transferring alkyl or aryl group,... 0.02 OrthoFinder output from all 47 species
Sam_g12533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12240 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14107 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g22636 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 198 223
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 123 168
IPR002885 Pentatricopeptide_repeat 324 371
IPR002885 Pentatricopeptide_repeat 625 672
IPR002885 Pentatricopeptide_repeat 422 470
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 524 570
IPR032867 DYW_dom 841 932
IPR046848 E_motif 742 803
No external refs found!