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  5. Lfl_g05018

Lfl_g05018 (DRD2, NRPE2, NRPD2A,...)


Aliases : DRD2, NRPE2, NRPD2A, NRPD2, DMS2

Description : component *(NRPE2) of RNA polymerase V complex & original description: none


Gene families : OG0000511 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05018

Target Alias Description ECC score Gene Family Method Actions
AT3G18090 NRPD2B nuclear RNA polymerase D2B 0.04 OrthoFinder output from all 47 species
Ceric.31G021700.1 DRD2, NRPE2,... not classified & original description: pacid=50574091... 0.03 OrthoFinder output from all 47 species
Dac_g02906 DRD2, NRPE2,... component *(NRPE2) of RNA polymerase V complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g17296 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g24202 DRD2, NRPE2,... component *(NRPE2) of RNA polymerase V complex &... 0.02 OrthoFinder output from all 47 species
Ore_g18280 NRPC2 component *(NRPC2) of RNA polymerase III complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR007646 RNA_pol_Rpb2_4 623 683
IPR007644 RNA_pol_bsu_protrusion 57 496
IPR007647 RNA_pol_Rpb2_5 704 747
IPR007642 RNA_pol_Rpb2_2 303 449
IPR007120 DNA-dir_RNAP_su2_dom 755 1115
IPR007645 RNA_pol_Rpb2_3 526 588
IPR007641 RNA_pol_Rpb2_7 1117 1207
No external refs found!