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  5. Lfl_g05282

Lfl_g05282 (TUB6)


Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none


Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05282
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00119100 TUB6,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00190040 TUB8,... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
AT1G20010 TUB5 tubulin beta-5 chain 0.05 OrthoFinder output from all 47 species
AT1G75780 TUB1 tubulin beta-1 chain 0.03 OrthoFinder output from all 47 species
AT2G29550 TUB7 tubulin beta-7 chain 0.05 OrthoFinder output from all 47 species
AT4G20890 TUB9 tubulin beta-9 chain 0.02 OrthoFinder output from all 47 species
AT5G12250 TUB6 beta-6 tubulin 0.09 OrthoFinder output from all 47 species
AT5G23860 TUB8 tubulin beta 8 0.03 OrthoFinder output from all 47 species
AT5G62690 TUB2 tubulin beta chain 2 0.03 OrthoFinder output from all 47 species
AT5G62700 TUB3 tubulin beta chain 3 0.03 OrthoFinder output from all 47 species
Adi_g008453 TUB8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g028533 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Adi_g048866 TUB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g068860 TUB7 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g085232 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085233 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Adi_g100349 TUB1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g105532 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aev_g20343 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ala_g03796 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ala_g22693 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Als_g10858 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10860 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g18460 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Als_g33099 TUB6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g08895 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Aop_g25844 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Aop_g33014 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Aop_g64603 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Azfi_s0077.g037980 TUB2 not classified & original description: CDS=457-1422 0.03 OrthoFinder output from all 47 species
Cba_g06879 TUB6 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g15537 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Cba_g69323 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.03G086000.1 TUB2, Ceric.03G086000 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.04G088300.1 TUB8, Ceric.04G088300 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ceric.06G048500.1 TUB2, Ceric.06G048500 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.07G056800.1 TUB6, Ceric.07G056800 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.19G036600.1 TUB6, Ceric.19G036600 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Ceric.30G059900.1 TUB6, Ceric.30G059900 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dac_g23831 TUB7 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dac_g42639 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dcu_g05390 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Dcu_g06899 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g13446 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Dcu_g13447 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dcu_g26815 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g31278 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g31279 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Dcu_g45218 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g04827 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Dde_g05253 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
GSVIVT01009913001 TUB7 Tubulin beta chain OS=Cicer arietinum 0.04 OrthoFinder output from all 47 species
GSVIVT01009914001 TUB1 Tubulin beta-1 chain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01019775001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01024825001 TUB8 Tubulin beta-8 chain OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037405001 TUB2 Tubulin beta-4 chain OS=Eleusine indica 0.05 OrthoFinder output from all 47 species
Gb_15590 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Gb_18746 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Gb_28116 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Gb_29799 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
LOC_Os01g18050.1 TUB6, LOC_Os01g18050 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
LOC_Os01g59150.1 TUB6, LOC_Os01g59150 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 OrthoFinder output from all 47 species
LOC_Os02g07060.1 TUB8, LOC_Os02g07060 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 OrthoFinder output from all 47 species
LOC_Os03g01530.1 TUB8, LOC_Os03g01530 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
LOC_Os03g45920.1 TUB2, LOC_Os03g45920 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Len_g06832 TUB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08235 TUB6 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g08236 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Len_g08237 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Len_g18229 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Len_g29601 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Len_g52480 TUB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06509 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Lfl_g27225 TUB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431251g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 OrthoFinder output from all 47 species
MA_10435130g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 310.0) 0.03 OrthoFinder output from all 47 species
MA_230579g0020 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
MA_79708g0010 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
MA_8465279g0010 TUB6 Tubulin beta-1 chain OS=Zea mays (sp|p18025|tbb1_maize : 126.0) 0.03 OrthoFinder output from all 47 species
MA_9451675g0010 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp1g20730.1 TUB6 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Mp2g00620.1 TUB2 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Msp_g25659 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g29673 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Msp_g39204 TUB8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45769 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Nbi_g06967 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Nbi_g06968 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Nbi_g18799 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Nbi_g23785 TUB8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15539 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Pir_g19218 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Ppi_g10734 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g22152 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Ppi_g35826 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Ppi_g61758 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022789 TUB6 not classified & original description: CDS=157-1053 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0264.g026924 TUB1 not classified & original description: CDS=124-1059 0.05 OrthoFinder output from all 47 species
Sam_g08880 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09510 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g09511 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g10053 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Sam_g25916 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Smo164404 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.07 OrthoFinder output from all 47 species
Smo170592 TUB6 Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Solyc03g025730.3.1 TUB8, Solyc03g025730 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Solyc06g035970.3.1 TUB8, Solyc06g035970 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Solyc06g076640.3.1 TUB8, Solyc06g076640 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Solyc10g080940.3.1 TUB6, Solyc10g080940 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Solyc10g085020.3.1 TUB8, Solyc10g085020 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species
Spa_g09907 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g13732 TUB7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20474 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g24819 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g40586 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.06 OrthoFinder output from all 47 species
Spa_g40800 TUB8 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g50619 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g54478 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Spa_g54479 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.05 OrthoFinder output from all 47 species
Spa_g54480 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g54481 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Spa_g54936 TUB6 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.03 OrthoFinder output from all 47 species
Tin_g09112 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.04 OrthoFinder output from all 47 species
Tin_g45513 TUB2 beta-Tubulin component *(TUB) of alpha-beta-Tubulin... 0.02 OrthoFinder output from all 47 species
Zm00001e000048_P003 TUB2, Zm00001e000048 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 OrthoFinder output from all 47 species
Zm00001e017421_P002 TUB6, Zm00001e017421 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 OrthoFinder output from all 47 species
Zm00001e025464_P001 TUB6, Zm00001e025464 component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR003008 Tubulin_FtsZ_GTPase 69 277
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 327 448
No external refs found!