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  5. Lfl_g05306

Lfl_g05306


Description : non-proteolytic core component *(ClpR) of chloroplast Clp-type protease complex & original description: none


Gene families : OG0000988 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000988_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05306

Target Alias Description ECC score Gene Family Method Actions
Adi_g019566 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Ala_g09550 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Aspi01Gene14175.t1 CLPR4, Aspi01Gene14175 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Azfi_s0015.g013857 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Dac_g06754 CLPR1, SVR2, NCLPP5 non-proteolytic core component *(ClpR) of chloroplast... 0.02 OrthoFinder output from all 47 species
Dcu_g02591 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
GSVIVT01003696001 CLPR4 Protein degradation.peptidase families.serine-type... 0.03 OrthoFinder output from all 47 species
LOC_Os01g16530.1 CLPR4, LOC_Os01g16530 non-proteolytic core component ClpR of chloroplast... 0.06 OrthoFinder output from all 47 species
Nbi_g04693 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pir_g00915 CLPR4 non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Pir_g11203 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Sam_g17177 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.03 OrthoFinder output from all 47 species
Spa_g22875 CLPR4 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g01803 No alias non-proteolytic core component *(ClpR) of chloroplast... 0.06 OrthoFinder output from all 47 species
Zm00001e017288_P001 CLPR4, Zm00001e017288 non-proteolytic core component ClpR of chloroplast... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP HCCA
BP GO:0006415 translational termination IEP HCCA
MF GO:0008079 translation termination factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032984 protein-containing complex disassembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 152 331
No external refs found!