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  5. Lfl_g05888

Lfl_g05888


Description : protein involved in PS-II assembly *(HHL1) & original description: none


Gene families : OG0006939 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006939_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05888
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00073250 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
AT1G67700 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.1 OrthoFinder output from all 47 species
Adi_g033649 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Ala_g07520 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Als_g00467 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g06998 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06739 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0531.g075832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Cba_g10861 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020710.126 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre03.g146167 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Dac_g16635 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Dcu_g31028 No alias protein involved in PS-II assembly *(HHL1) & original... 0.1 OrthoFinder output from all 47 species
Dde_g43832 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g04373 No alias protein involved in PS-II assembly *(HHL1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010306001 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Gb_36498 No alias HHL1 protein involved in PS-II assembly 0.09 OrthoFinder output from all 47 species
LOC_Os02g38820.1 LOC_Os02g38820 HHL1 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Len_g53688 No alias protein involved in PS-II assembly *(HHL1) & original... 0.02 OrthoFinder output from all 47 species
MA_99789g0010 No alias HHL1 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Mp4g20930.1 No alias HHL1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Msp_g02701 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Nbi_g12181 No alias protein involved in PS-II assembly *(HHL1) & original... 0.06 OrthoFinder output from all 47 species
Ore_g28473 No alias protein involved in PS-II assembly *(HHL1) & original... 0.07 OrthoFinder output from all 47 species
Ore_g32779 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Pir_g13350 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Pnu_g10877 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Pp3c14_9580V3.1 Pp3c14_9580 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g54816 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006133 No alias protein involved in PS-II assembly *(HHL1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g09632 No alias protein involved in PS-II assembly *(HHL1) & original... 0.09 OrthoFinder output from all 47 species
Solyc05g014310.3.1 Solyc05g014310 HHL1 protein involved in PS-II assembly 0.05 OrthoFinder output from all 47 species
Spa_g52699 No alias protein involved in PS-II assembly *(HHL1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e015029_P001 Zm00001e015029 HHL1 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR045388 HHL1-like 94 210
No external refs found!