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  5. Lfl_g05890

Lfl_g05890


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g05890

Target Alias Description ECC score Gene Family Method Actions
Aev_g09014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14535 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g04353 PHL1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Als_g32729 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dac_g43661 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g21452 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g00938 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31338 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01036717001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
LOC_Os02g04640.1 LOC_Os02g04640 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Len_g09751 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24340 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g31008 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g59890 No alias KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21962 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27536 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g05502 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e001526_P001 Zm00001e001526 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e018018_P002 KAN4, ATS, Zm00001e018018 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 138 184
IPR001005 SANT/Myb 51 101
No external refs found!