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  5. Lfl_g06152

Lfl_g06152


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06152
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 CIA2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
Aev_g34755 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08686 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04399 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25362 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20220 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G076600.1 Ceric.16G076600 not classified & original description: pacid=50589566... 0.02 OrthoFinder output from all 47 species
Cre15.g635100 No alias No description available 0.01 OrthoFinder output from all 47 species
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
LOC_Os06g15330.1 LOC_Os06g15330 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Len_g09104 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17180 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40078 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37830 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15685 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005433_P002 Zm00001e005433 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Zm00001e012194_P001 Zm00001e012194 transcription factor (BBX-CO) 0.04 OrthoFinder output from all 47 species
Zm00001e015732_P002 Zm00001e015732 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004089 carbonate dehydratase activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 31 71
IPR010402 CCT_domain 498 540
No external refs found!