Lfl_g06642


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g06642

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
Adi_g015420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082055 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g20571 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g40130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11078 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13276 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20117 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25080 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g30691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38788 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40546 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02588 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04187 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16322 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18136 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28232 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68927 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0108.g045187 No alias not classified & original description: CDS=1-2178 0.03 OrthoFinder output from all 47 species
Azfi_s0126.g048645 No alias not classified & original description: CDS=1-2262 0.03 OrthoFinder output from all 47 species
Cba_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35191 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g44509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77657 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G059700.1 CRR22, Ceric.23G059700 not classified & original description: pacid=50609689... 0.05 OrthoFinder output from all 47 species
Ceric.24G003700.1 Ceric.24G003700 not classified & original description: pacid=50629583... 0.03 OrthoFinder output from all 47 species
Ceric.27G011400.1 Ceric.27G011400 not classified & original description: pacid=50605728... 0.03 OrthoFinder output from all 47 species
Dac_g03363 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04703 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30248 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19078 EMB2261 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04921 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09014 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09519 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11227 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16392 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16911 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21688 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21984 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22999 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23899 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26090 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26387 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g31028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36299 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os11g14980.1 LOC_Os11g14980 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Len_g13283 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18318 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25458 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05274 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18215 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48694 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04969 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11766 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g19585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g20344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38472 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05576 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12551 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15077 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15248 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23954 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26217 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26958 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g32558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60422 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63838 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03628 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05273 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08728 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11016 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32640 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48204 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54649 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g59303 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60243 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64055 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo125795 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
Solyc01g081020.1.1 Solyc01g081020 RNA editing factor (OTP80) 0.02 OrthoFinder output from all 47 species
Solyc01g098150.3.1 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11567 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12946 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14017 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g18554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23700 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29657 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55598 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g57231 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07829 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17885 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000301_P001 Zm00001e000301 Pentatricopeptide repeat-containing protein At4g35130,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 300 324
IPR002885 Pentatricopeptide_repeat 98 122
IPR046848 E_motif 345 398
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 225 272
No external refs found!