Aliases : EMB2758
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00126p00080460 | OTP82,... | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
| AT3G08820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G23330 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT5G52630 | MEF1 | mitochondrial RNAediting factor 1 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g002797 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g04417 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g22451 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g07588 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene41783.t2 | Aspi01Gene41783 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023799 | No alias | not classified & original description: CDS=1-1911 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048744 | No alias | not classified & original description: CDS=1-2109 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g35110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.13G049100.1 | Ceric.13G049100 | not classified & original description: pacid=50635384... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G077400.1 | Ceric.18G077400 | not classified & original description: pacid=50622022... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G046800.1 | Ceric.21G046800 | not classified & original description: pacid=50603820... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17231 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16434 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g22358 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g28218 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g37552 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g17579 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_109016g0020 | No alias | Pentatricopeptide repeat-containing protein At1g11290,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_5858185g0010 | No alias | Pentatricopeptide repeat-containing protein At4g30700... | 0.02 | OrthoFinder output from all 47 species | |
| MA_7691g0010 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | OrthoFinder output from all 47 species | |
| MA_86894g0010 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g28534 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g10308 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g15839 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g25096 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27549 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g40763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04708 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57076 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g52827 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0038.g012043 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-1878 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g07135 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g12399 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13514 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14863 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g051480.1.1 | OTP84, Solyc04g051480 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g17304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028330_P001 | PTAC9, OSB2,... | ssDNA-binding protein (OSB). TAC9 cofactor of... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037542_P001 | Zm00001e037542 | Pentatricopeptide repeat-containing protein At4g16470... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004180 | carboxypeptidase activity | IEP | HCCA |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | HCCA |
| MF | GO:0008236 | serine-type peptidase activity | IEP | HCCA |
| MF | GO:0008238 | exopeptidase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017171 | serine hydrolase activity | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 543 | 565 |
| IPR002885 | Pentatricopeptide_repeat | 442 | 466 |
| IPR002885 | Pentatricopeptide_repeat | 340 | 364 |
| IPR002885 | Pentatricopeptide_repeat | 238 | 261 |
| IPR002885 | Pentatricopeptide_repeat | 468 | 514 |
| IPR002885 | Pentatricopeptide_repeat | 264 | 310 |
| IPR002885 | Pentatricopeptide_repeat | 365 | 412 |
| IPR002885 | Pentatricopeptide_repeat | 161 | 209 |
| No external refs found! |
